My thesis is mostly focused on proteins, and be sure that I got really familiar with Uniprot. Uniprot comes out with a strong user interface that ease any approach. Biochemists can easily find what they need as a bioinformatician can set up his scripts to obtain information directly from the database. In fact, Uniprot has … Continue reading Dealing with Uniprot- Python programming interface.
The Ensembl database comes out with a strong and well documented Application Programming interface. I must observe that Ensembl is much better than other DBs such as Uniprot or NCBI, wich look more oriented in providing good graphical interfaces than facilitate programmers' life, becoming a very good tool for wet lab biologists who need a … Continue reading Learn Ensembl API on EBI's website. An open workshop.